李龙, 司景磊, 夏攀洁, 綦文晶, 龙开旭, 夏利, 何剑雄, 吴敏, 兰干球. 2017: 广西巴马小型猪ANK1基因启动子克隆及其活性分析. 南方农业学报, 48(4): 716-720. DOI: 10.3969/j.issn.2095-1191.2017.04.025
引用本文: 李龙, 司景磊, 夏攀洁, 綦文晶, 龙开旭, 夏利, 何剑雄, 吴敏, 兰干球. 2017: 广西巴马小型猪ANK1基因启动子克隆及其活性分析. 南方农业学报, 48(4): 716-720. DOI: 10.3969/j.issn.2095-1191.2017.04.025
LI Long, SI Jing-lei, XIA Pan-jie, QI Wen-jing, LONG Kai-xu, XIA Li, HE Jian-xiong, WU Min, LAN Gan-qiu. 2017: ANK1 gene promoter in Guangxi Bama miniature pig:Cloning and activity analysis. Journal of Southern Agriculture, 48(4): 716-720. DOI: 10.3969/j.issn.2095-1191.2017.04.025
Citation: LI Long, SI Jing-lei, XIA Pan-jie, QI Wen-jing, LONG Kai-xu, XIA Li, HE Jian-xiong, WU Min, LAN Gan-qiu. 2017: ANK1 gene promoter in Guangxi Bama miniature pig:Cloning and activity analysis. Journal of Southern Agriculture, 48(4): 716-720. DOI: 10.3969/j.issn.2095-1191.2017.04.025

广西巴马小型猪ANK1基因启动子克隆及其活性分析

ANK1 gene promoter in Guangxi Bama miniature pig:Cloning and activity analysis

  • 摘要: 目的克隆广西巴马小型猪ANK1基因启动子,确定其活性核心区,为研究ANK1基因启动子与肉质性状的相关性及构建动物疾病模型打下基础.方法通过在线软件对ANK1基因启动子的转录因子结合位点进行预测,根据转录因子结合位点设计特异引物扩增不同长度的ANK1基因启动子片段,并利用双荧光素酶试剂盒检测其荧光值,以确定不同ANK1基因启动子片段的活性.结果发现ANK1基因启动子存在1个转录起始位点(TSS)、2个CpG岛和多个转录因子结合位点,并以此作为ANK1基因启动子的分段依据,将其分割为P638、P791、P1113、P1163、P1648、P1694、P1796和P2074等8个不同长度的目的片段.成功克隆获得的8个ANK1基因启动子片段经KpnⅠ和HindⅢ双酶切、T4真核表达载体连接、细胞转染等方法构建8个双荧光素酶重组报告基因,双荧光素酶试剂盒检测结果显示,广西巴马小型猪ANK1基因启动子在P1796片段活性最强,与其他片段存在显著差异(P<0.05).结论成功克隆获得广西巴马小型猪ANK1基因启动子的8个片段,且利用双荧光素酶试剂盒检测确定其核心启动子区域出现在P1796片段.

     

    Abstract: ObjectiveIn this study, ANK1 gene promoter of Guangxi Bama miniature pig was cloned, and its core ac-tivity areas were detected, so as to lay a foundation for researching correlation between ANK1 gene promoter and meat qual-ity traits, and establishing animal disease model. MethodTranscription factor binding sites of ANK1 promoter were pre-dicted with online software, ANK1 promoter fragments of different lengths were amplified by specific primers based on tran-scription factor binding sites. To determine the activity of different fragments, fluorescence values of different promoter re-gions were tested using dual luciferase kits. ResultOne transcription starting sites (TSS), two CpG islands and multiple transcription factor binding sites were found in ANK1 promoter. The results served as basis for segmentation of ANK1 gene promoter and it was devided into eight target fragments of different length, namely P638,P791,P1113,P1163,P1648, P1694,P1796 and P2074. The eight segments was cloned. Through KpnⅠand HindⅢdouble enzyme digestion, T4 eukaryotic expression vector linkage and cell transfection, eight dual luciferase kit recombination reporter genes were established. Based on dual luciferase detection, the activity of ANK1 gene promoter was the strongest in P1796 fragment, and the difference with others fragments was significant (P<0.05). ConclusionIn this study, eight fragments of the ANK1 gene promoter from Guangxi Bama miniature pig are successfully cloned and the core region of the ANK1 gene promoter is identified as P1796 fragment by dual luciferase kits.

     

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