牦牛附睾不同区段上皮细胞SLC基因家族的表达分析

Expression analysis of SLC gene family in epithelial cells of different segments of yak epididymis

  • 摘要: 【目的】揭示附睾不同区段溶质载体(SLC)蛋白的调控及功能差异,明确SLC基因家族在牦牛附睾中的表达情况,为提高牦牛繁育性能提供理论依据。【方法】从牦牛附睾头、附睾体和附睾尾的上皮细胞转录组数据中筛选出54个SLC基因家族差异表达基因(DEGs),通过关联网络分析筛选出关键基因,然后采用实时荧光定量PCR检测DEGs在牦牛附睾不同区段上皮细胞中的表达情况。【结果】在牦牛附睾头vs附睾体中有SLC2A9SLC8A1和SLC29A1等18个DEGs呈上调表达,SLC41A2SLC40A1SLC26A3等24个DEGs呈下调表达;在附睾头vs附睾尾中有SLC16A2SLC7A1SLC2A9等17个DEGs呈上调表达,SLC39A4SLC26A3SLC40A1等15个DEGs呈下调表达;在附睾体vs附睾尾中有SLC5A3SLC16A2SLC46A3等6个DEGs呈上调表达,SLC25A20SLC20A2SLC27A1等6个DEGs呈下调表达。通过关联网络分析筛选出13个关键基因:SLC41A2、SLC7A8、SLC26A3SLC39A11SLC30A4SLC1A1SLC7A2、SLCO2A1、SLC6A2SLC22A17SLC5A5SLC22A18SLC30A4。其中,SLC26A3基因是附睾头vs附睾体、附睾头vs附睾尾2组样本的关键基因,且SLC26A3基因在附睾头的相对表达量显著高于附睾体和附睾尾(P<0.05)。牦牛附睾SLC基因家族在矿物质吸收通路上富集的数量最多,其中SLC26A3基因参与矿物质吸收和胰腺物分泌2条信号通路。【结论】从牦牛附睾不同区段上皮细胞中筛选得到13个SLC基因家族调控基因,其中SLC26A3基因是附睾头vs附睾体、附睾头vs附睾尾2组样本的共有关键基因,通过调控矿物质吸收而影响雄性牦牛的生殖能力。

     

    Abstract: 【Objective】The regulation and functional differences of solute carrier(SLC)protein in different segments of epididymis were revealed,and the expression of SLC gene family in yak epididymis was clarified to provide theoretical basis for improving the breeding performance of yaks.【Method】A total of 54 differentially expressed genes(DEGs)of SLC gene family were screened from the transcriptome data of epithelial cells of yak epididymis caput,corpus,and cauda epithelial cells. Key genes were screened by association network analysis,and then real-time fluorescence quantitative PCR was used to detect the expression of DEGs in epithelial cells of different segments of yak epididymis.【Result】In the comparison between caput vs corpus,18 DEGs including SLC2A9SLC8A1 and SLC29A1 were up-regulated,while 24 DEGs including SLC41A2SLC40A1 and SLC26A3 were down-regulated. In the caput vs cauda,17 DEGs including SLC16A2SLC7A1 and SLC2A9 were up-regulated,while 15 DEGs including SLC39A4SLC26A3 and SLC40A1 were down-regulated. For the corpus vs cauda,6 DEGs including SLC5A3SLC16A2 and SLC46A3 were up-regulated,while 6 DEGs including SLC25A20SLC20A2 and SLC27A1 were down-regulated. A total of 13 key genes were selected through association network analysis:SLC41A2,SLC7A8,SLC26A3SLC39A11SLC30A4SLC1A1SLC7A2, SLCO2A1,SLC6A2SLC22A17SLC5A5SLC22A18 and SLC30A4. Among them,SLC26A3 gene was the key gene in both the caput vs corpus and caput vs cauda groups. SLC26A3 gene exhibited significantly higher expression in the caput compared to the corpus and cauda segments(P<0.05). The SLC gene family of yak epididymis was the most abundant in mineral absorption pathway,and SLC26A3 gene was involved in 2 signaling pathways:mineral absorption and pancreatic secretion.【Conclusion】Thirteen regulatory genes of SLC gene family are selected from epithelial cells of different segments of yak epididymis,among which SLC26A3 gene is the common key gene of caput vs corpus and caput vs cauda groups,which influences the reproductive ability of male yaks by regulating mineral absorption.

     

/

返回文章
返回