旱柳SmGAD基因在响应淹水胁迫中的功能研究

Functional study of SmGAD gene in Salix matsudana in response to waterlogging stress

  • 摘要:目的】研究旱柳SmGAD基因在响应淹水胁迫中的功能,为解析柳树耐淹机制及耐淹柳树育种提供理论依据和候选靶基因。【方法】以一年生柳树枝条为材料,利用生物信息学工具分析SmGAD蛋白理化特性、保守结构域、蛋白结构域、亲/疏水性及启动子区顺式作用元件,并构建系统发育树。通过实时荧光定量PCR(qRT-PCR)检测SmGAD基因的表达变化。克隆SmGAD基因,构建原核表达载体pET32a-SmGAD和沉默载体pYL156-SmGAD,采用病毒诱导基因沉默(VIGS)技术沉默SmGAD,经淹水处理验证基因功能,同时进行原核表达,诱导蛋白表达并测定H2O2胁迫下菌液OD600 nm变化。【结果】旱柳SmGAD基因编码区(CDS)全长为1497 bp,SmGAD蛋白由498个氨基酸残基组成,理论分子量为56512.01 Da,理论等电点为5.80,脂肪指数为90.80,不稳定系数为35.82,总平均亲/疏水性系数为-0.221。系统发育分析结果显示,SmGAD蛋白与茶树、水稻、拟南芥和棉花等6个物种的GAD同源蛋白均具有高度相似性。启动子区顺式作用元件分析结果显示,SmGAD基因启动子区包含茉莉酸甲酯响应元件、生长素响应元件、光响应元件、干旱响应元件及醇溶蛋白代谢响应元件等。实时荧光定量PCR分析结果显示,淹水处理后不同柳树品种中SmGAD基因的表达趋势存在差异。VIGS试验结果显示,沉默株系在淹水胁迫下叶片脱落及腐烂现象较严重,细胞膜遭受严重的过氧化损伤,根系生长情况较差。原核表达试验表明SmGAD蛋白在清除H2O2中发挥重要功能。【结论SmGAD基因是旱柳响应淹水和缺氧胁迫调控网络中的正调控因子,可通过减轻氧化胁迫损伤等机制增强植株对淹水胁迫的抵抗力。原核表达试验证实SmGAD蛋白具有清除H2O2的能力。

     

    Abstract:Objective】The study aimed to investigate the functions of SmGAD gene in Salix matsudana in response to waterlogging stress, provide theoretical basis and candidate target genes for elucidating willow waterlogging tolerance mechanism and breeding willows tolerant to waterlogging.【Method】Using one-year-old willow branches as materials, bioinformatic tools were employed to analyze physicochemical properties, conserved domains, protein domains, hydrophilicity/hydrophobicity, and promoter cis-acting elements of the SmGAD protein, and a phylogenetic tree was constructed. Real-time fluorescence quantitative PCR (qRT-PCR) was used to detect the expression changes of SmGAD gene. The SmGAD gene was cloned, and the prokaryotic expression vector pET32a-SmGAD and silencing vector pYL156-SmGAD were constructed.Virus-induced gene silencing (VIGS) technology was used to silence SmGAD, and the gene function was verified through waterlogging treatment. Meanwhile, prokaryotic expression was performed to induce protein expression, and the changes in bacterial culture OD600 nm under H2O2 stress were measured.【Result】The coding sequence (CDS) of SmGAD gene in Salix matsudana was 1497 bp in full length, and SmGAD protein consisted of 498 amino acid residues, with a theoretical molecular mass of 56512.01 Da, a theoretical isoelectric point of 5.80, an aliphatic index of 90.80, an instability index of 35.82, and a grand average of hydropathicity hydrophobicity coefficient of -0.221. Phylogenetic analysis revealed that the SmGAD protein shared high similarity with GAD homologous proteins in six species, including Camellia sinensis L., Oryza sativa L., Arabidopsis thaliana L., and Gossypium hirsutum L. Promoter cis-acting element analysis showed that the promoter region of SmGAD gene contained methyl jasmonate -responsive elements, auxin-responsive elements, light-responsive elements, drought-responsive elements, prolamin-metabolism-responsive elements,and so on. Real-time fluorescence quantitative PCR analysis results revealed that the expression trends of SmGAD gene differed among various willow varieties after waterlogging treatment. VIGS experiment results showed that the silenced lines exhibited more severer leaf abscission and decay under waterlogging stress, with substantial peroxidative damage to cell membranes, along with poor root growth. Prokaryotic expression experiments demonstrated that the SmGAD protein played an important role in scavenging H2O2.【ConclusionSmGAD gene, a positive regulatory factor in regulatory network of Salix matsudana in response to waterlogging and hypoxia stresses, can enhance plant resistance to waterlogging stress through mechanisms such as alleviating oxidative stress damage. Prokaryo-tic expression experiments confirm that the SmGAD protein can scavenge H2O2.

     

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