RSAD2基因敲低揭示宿主抵抗羊口疮病毒感染潜在机制

Effects of RSAD2 gene knockdown on elucidating potential mechanism of host resistance to Orf virus infection

  • 摘要: 【目的】 探究S-腺苷蛋氨酸结构域蛋白2(Radical S-adenosyl methionine domain-containing 2,RSAD2),在羊口疮病毒(Orf virus,ORFV)感染下的免疫应答机制,为羊口疮的防控与治疗提供理论依据。【方法】 采用转录组测序对ORFV感染后12 h的山羊皮肤成纤维(GSF)细胞(空白对照)、稳定表达非靶向shRNA的GSF细胞(阴性对照组)和RSAD2基因敲低GSF细胞(RSAD2i GSF细胞,稳定表达靶向RSAD2基因的shRNA)进行分析,结合前期研究中各组细胞于ORFV感染0和6 h的测序数据进行比较。【结果】 差异表达基因(DEGs)筛选结果显示,与0 h相比,RSAD2i GSF细胞在ORFV 感染12 h有1923个DEGs。GSEA分析结果显示,RSAD2i GSF细胞在感染6 h较12 h有更多免疫相关信号通路显著下调(P<0.05,下同)。DAVID和KOBAS分析结果显示,RSAD2i-ORFV基因集富集到IL-17信号通路、细胞因子—细胞因子受体相互作用和TNF信号通路等多个与免疫相关的信号通路。RSAD2i-ORFV基因集中的424个DEGs在ORFV感染RSAD2i GSF细胞后0、6和12 h(R0→R6→R12)呈现8种表达模式。其中,表达模式1、2和5具有显著性,且为不同类型的下调表达。蛋白互作(PPI)网络预测结果显示,IL-6、IL-1α和IL-1β与其他蛋白间的关联较多且互作更强,IL-6可能是PPI网络中最关键的蛋白。实时荧光定量PCR检测结果显示,除IL-13RA2基因外,TNFSF15IL-1BMAP3K7TGFB2MAPK6IL-11基因的相对表达量变化趋势与测序结果均一致。【结论】 ORFV感染早期,RSAD2可能通过正向调控IL-17信号通路,促进下游促炎细胞因子IL-6产生,从而介导宿主对病毒的防御反应;而ORFV则可借助编码蛋白直接影响IL-17信号通路以实现免疫逃逸。RSAD2—IL-17—IL-6轴可能是宿主抵抗ORFV感染的潜在机制。

     

    Abstract: 【Objective】 This study aimed to investigate the immune response mechanism of S-adenosyl methionine domain-containing protein 2 (RSAD2) under Orf virus (ORFV) infection, providing theoretical basis for the control and treatment of Orf. 【Method】 Transcriptome sequencing was performed on goat skin fibroblast (GSF) cells (control group), stably expressing non-targeted shRNA GSF cells (negative control group), and RSAD2-knockdown GSF cells (RSAD2i GSF cells, stably expressing RSAD2 targeting interference shRNA ) at 12 h post ORFV infection. The sequencing data of cells from each group at 0 and 6 h post infection from previous studies were also used for comparison. 【Result】 The screening results of differentially expressed genes (DEGs) showed that RSAD2i GSF cells had 1923 DEGs at 12 h post infection compared with 0 h post infection. Gene set enrichment analysis (GSEA) indicated that RSAD2i GSF cells exhibited more significant down-regulated immune-related signaling pathways at 6 h post infection than at 12 h post infection (P<0.05,the same below). Database for annotation, visualization, and integrated discovery (DAVID) and KEGG orthology based annotation system (KOBAS) analyses showed that RSAD2i-ORFV gene set was enriched to immune-related signaling pathways, such as IL-17 signaling pathway, cytokine-cytokine receptor interaction, and TNF signaling pathway. The 424 DEGs of RSAD2i-ORFV gene set showed 8 expression patterns at 0, 6, and 12 h post infection (R0→R6→R12) in RSAD2i GSF cells. Among them, the expression patterns 1, 2, and 5 were significant and were different types of down-regulated expression. Protein-protein interaction (PPI) network analysis indicated that IL-6, IL-1α, and IL-1β had more associations and stronger interactions with other proteins, with IL-6 being predicted as the most key protein in the PPI network. Real-time fluorescence quantitative PCR detection showed that the changing trend of relative expression of TNFSF15IL-1BMAP3K7TGFB2MAPK6, and IL-11, except IL-13RA2 were consistent with the sequencing results. 【Conclusion】 At the early stage of ORFV infection, RSAD2 may positively regulate the IL-17 signaling pathway to promote the production of downstream pro-inflammatory cytokine IL-6, thereby mediating the defense response of the host to ORFV; ORFV may achieve immune escape with the assistance of encoded proteins to directly influence the IL-17 signaling pathway. The RSAD2—IL-17—IL-6 axis may be the potential mechanism for host resistance to ORFV infection.

     

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