齿瓣石斛黄酮醇合成酶基因(DdFLSs)克隆及体外功能分析

Cloning and in vitro functional analysis of flavonol synthase genes from Dendrobium devonianumDdFLSs

  • 摘要: 【目的】 克隆齿瓣石斛黄酮醇合成酶(FLS)基因(DdFLSs),并进行体外功能分析,为深入探究齿瓣石斛黄酮类化合物合成调控机制提供理论依据。【方法】 基于齿瓣石斛叶片转录组测序数据,筛选并克隆DdFLSs候选基因,并对其进行生物信息学分析及原核系统表达,通过体外酶活验证DdFLSs的催化活性。【结果】 成功克隆出2个DdFLSs基因,分别命名为DdFLS1DdFLS2DdFLS1DdFLS2基因的开放阅读框(ORF)长度均为1002 bp,编码333个氨基酸残基,相对分子质量分别为37.54和37.71 kD,均为不稳定的亲水性蛋白,均含有典型的2OG-Fe(II)-Oxy、PcbC、PLN02704保守结构域,属于Fe2+和2-酮戊二酸依赖型双加氧酶(2-ODD)超家族,二者的二级结构中均以α-螺旋、无规则卷曲占比较高,三级结构与模板B0FYE8.1.A Flavonol synthase的一致性均为70%。DdFLS1和DdFLS2与拟南芥、洋葱、铁皮石斛的FLS氨基酸序列相似性为75.98%~98.70%,其中,与同为石斛属的铁皮石斛FLS氨基酸序列相似性最高,且在系统发育树中处在同一小分支,表明二者亲缘关系最近。在16 ℃条件下用0.5 mmol/L IPTG诱导14 h后,DdFLS1和DdFLS2蛋白在原核表达系统中成功表达,用250 mmol/L咪唑洗脱缓冲液纯化时效果最佳。体外酶活验证显示,DdFLS1和DdFLS2蛋白并未表现出典型的FLS活性,即不能催化二氢山柰酚、二氢槲皮素、二氢杨梅素生成相应的黄酮醇,但二者能催化柚皮素生成二氢山柰酚,表明其具有黄烷酮3-羟化酶(F3H)的活性。【结论】 从齿瓣石斛克隆获得的2个DdFLSs基因,其编码蛋白无FLS活性,但具有F3H活性,可能是由于DdFLS1和DdFLS2蛋白2个关键位点均发生了突变,导致DdFLS1和DdFLS2活性发生转变。

     

    Abstract: 【Objective】 To clone the flavonol synthase (FLS) genes from Dendrobium devonianumDdFLSs) and analyze their in vitro functions, which could provide theoretical basis for further exploring the regulatory mechanism of flavonoid biosynthesis in Dendrobium devonianum.【Method】 Based on the transcriptome sequencing data of Dendrobium devonianum leaves, candidate DdFLSs genes were screened and cloned. Bioinformatics analysis and prokaryotic system expression were performed on the cloned DdFLS genes, and the catalytic activity of DdFLSs was verified by in vitro enzyme activity assay.【Result】 Two DdFLSs genes were successfully cloned and named DdFLS1 and DdFLS2 respectively. The open reading frames (ORF) of DdFLS1 and DdFLS2 genes were both 1002 bp in length, each encoding 333 amino acids, with relative molecular weights of 37.54 kD and 37.71 kD respectively. Both proteins were unstable hydrophilic proteins and contained typical conserved domains including 2OG-Fe(II)-Oxy, PcbC, and PLN02704, belonging to the Fe2+ and 2-oxoglutarate-dependent dioxygenase (2-ODD) superfamily. For the secondary structure of both proteins, α-helix and random coil accounted for a high proportion, and their tertiary structures shared 70% identity with the template B0FYE8.1.A Flavonol synthase. The amino acid sequence similarity of DdFLS1 and DdFLS2 with FLS proteins from Arabidopsis thalianaAllium cepa and Dendrobium officinale ranged from 75.98% to 98.70%. Among them, DdFLS1 and DdFLS2 had the highest amino acid sequence similarity with FLS from Dendrobium officinale, which were in the same genus, and clustered in the same small branch in the phylogenetic tree, indicating the closest genetic relationship between them. Under the induction condition of 0.5 mmol/L isopropyl β-D-thiogalactoside (IPTG) at 16 ℃ for 14 h, DdFLS1 and DdFLS2 proteins were successfully expressed in the prokaryotic expression system. The purification effect was the best when using 250 mmol/L imidazole elution buffer. In vitro enzyme activity verification showed that, DdFLS1 and DdFLS2 proteins did not exhibit typical FLS activity, that was, they could not catalyze dihydrokaempferol, dihydroquercetin, and dihydromyricetin to generate corresponding flavonols. However, they could catalyze naringenin to generate dihydrokaempferol, indicating that they possessed the activity of flavanone 3-hydroxylase (F3H).【Conclusion】 Two DdFLSs genes have been cloned from Dendrobium devonianum, their encoded proteins do not have FLS activity but have F3H activity. This may be due to mutations in two key sites of DdFLS1 and DdFLS2 proteins, leading to the transformation of their activities.

     

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