火龙果HSP70基因家族鉴定及高温响应表达分析

Identification and high-temperature response expression analysis of HSP70 gene family in Hylocereus undatus

  • 摘要: 【目的】 探究火龙果HSP70基因家族成员的分布特征与生物学功能,为揭示火龙果HSP70家族成员在响应高温胁迫中的分子机制提供理论依据。【方法】 利用生物信息学方法从火龙果全基因组中鉴定出HSP70基因家族成员,分析其保守基序及编码蛋白特征、基因结构、染色体定位和启动子顺式作用元件,并进行系统发育和基因共线性分析,通过基因表达分析和实时荧光定量PCR探究其组织特异性表达特征及高温胁迫对HSP70基因相对表达量的影响。【结果】 共鉴定出15个火龙果HSP70基因家族成员,分布于9条染色体上,共鉴定出19个Motif,其中Motif 1是所有成员共有的保守基序,7个成员含4个及以上内含子。启动子顺式作用元件分析显示,HSP70基因家族包含多种与逆境胁迫相关的元件,包括激素响应、逆境胁迫响应及生长发育调控等。系统发育和基因共线性分析结果显示,火龙果HSP70基因家族被分为3个类群,其与拟南芥HSP70家族基因之间不存在共线性,与甜菜HSP70家族基因之间存在明显共线性。基因表达分析结果显示,火龙果HSP70基因家族成员的表达具有组织特异性,其中2个基因在果肉中特异性表达,1个基因在刺座中特异性表达。实时荧光定量PCR结果显示,与对照相比,5个基因经高温胁迫处理后相对表达量均显著上调,其中HU07G00259.1基因的上调幅度最大,相对表达量较对照提升约40倍。【结论】 共鉴定出15个火龙果HSP70基因家族成员,HU01G00744.1、HU01G00501.1、HU05G01041.1、HU07G00259.1和HU04G01697.1基因在高温胁迫处理下相对表达量显著上调,表现出明显的高温响应特征,其中HU07G00259.1基因可能是火龙果茎蔓高温响应的关键调控因子。

     

    Abstract: 【Objective】 This study aimed to investigate the distribution patterns and biological functions of the HSP70 gene family members in Hylocereus undatus, thereby providing theoretical basis for elucidating the molecular mechanisms underlying the high-temperature stress response of HSP70 family members in Hylocereus undatus. 【Method】 Using bioinformatic methods, the HSP70 gene family members were identified from the whole-genome of Hylocereus undatus to analyze their conserved motifs, encoded protein characteristics, gene structures, chromosomal localizations, and promoter cis-acting elements. The phylogenetic analysis and colinearity analysis were performed. Gene expression analysis and real-time fluorescence quantitative PCR were used to investigate their tissue-specific expression characteristics and the effects of high-temperature stress on relative expressions of HSP70 gene. 【Result】 A tolal of 15 HSP70 gene family members were identified from Hylocereus undatus, and they distributed across 9 chromosomes. A total of 19 motifs were identified, among which Motif 1 was a conserved motif shared by all members, and 7 family members contained more than 4 introns. Analysis of promoter cis-acting elements revealed that the HSP70 gene family contained various elements associated with stress, including those involved in hormone response, stress response, as well as growth and development regulation. Phylogenetic and gene colinearity analysis results indicated that: the HSP70 gene family in Hylocereus undatus was divided into 3 major groups; there was no colinearity with the HSP70 gene family in Arabidopsis thaliana, but significant colinearity existed with the HSP70 gene family in Beta vulgaris. Gene expression analysis results showed that the expression of Hylocereus undatus HSP70 gene family members was tissue-specific,two of which showed specific expressions in pulp,and one of which showed specific expressions in areole. Real-time fluorescence quantitative PCR results showed that, compared to the control, the relative expressions of the five genes were significantly up-regulated after high-temperature stress treatment. Among them, the HU07G00259.1 gene exhibited the greatest up-regulation, with its relative expression increasing approximately by 40 folds compared to the control. 【Conclusion】 A total of 15 members of the HSP70 gene family in Hylocereus undatus were identified: HU01G00744.1, HU01G00501.1, HU05G01041.1, HU07G00259.1, and HU04G01697.1 are significantly up-regulated under high-temperature stress treatment, demonstra-ting distinct high-temperature response characteristics. Among these, the HU07G00259.1 gene is likely a key regulatory factor in the high-temperature response of Selenicereus spp. vines.

     

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