绵羊源马赛阿克曼氏菌分离培养及其功能分析

Isolation, cultivation, and function analysis of sheep-derived Akkermansia massiliensis

  • 摘要: 【目的】 开展绵羊源马赛阿克曼氏菌分离培养及其功能分析,为绵羊肠道炎症疾病的防控和探究绵羊源马赛阿克曼氏菌在肠道健康中的益生潜力提供理论依据。【方法】 采集绵羊新鲜粪便,在37 ℃厌氧条件下分离并鉴定1株马赛阿克曼氏菌,通过全基因组测序解析其基因组特征与潜在功能。构建葡聚糖硫酸钠(DSS)诱导的结肠炎小鼠模型,经灌胃干预评估马赛阿克曼氏菌对肠道炎症的抑制效果及其对肠道微生物群落组成的调节作用。【结果】 Ms2526菌株基因组完整度100%,污染率0.12%,编码密度0.874,基因组全长3112518 bp,GC含量58%,基因总数2622个。Ms2526菌株与马赛阿克曼氏菌EB-AMDK-40亲缘关系最近,以99%的自展支持率聚为一支,与马赛阿克曼氏菌Akk2000等其他马赛阿克曼氏菌在分支长度上存在差异。Ms2526菌株基因组中含有与Amuc_1100和P9蛋白高度同源的编码基因。Ms2526菌株编码基因富集到新陈代谢类别的数量最多,主要包括碳水化合物代谢、辅助因子和维生素代谢、其他次生代谢产物生物合成、萜类化合物与聚酮类化合物代谢等信号通路,机体系统类别中有5个基因富集到免疫系统信号通路上。Ms2526菌株基因组中共有157个基因被注释到六大类碳水化合物活性酶,糖基转移酶和糖苷水解酶注释到的基因数量较多。Ms2526菌株基因组存在1个大环内酯类抗生素耐药基因erm(B)。Ms2526菌株能缓解DSS诱导的小鼠结肠炎,改善结肠组织和黏膜结构完整性,并提高肠道菌群物种丰度。【结论】 绵羊源马赛阿克曼氏菌Ms2526基因组蕴含与碳水化合物代谢、免疫稳态调控及黏膜修复相关的遗传基础。Ms2526菌株能有效缓解DSS诱导的小鼠结肠炎,其作用与增强肠道屏障完整性、调节系统性炎症及恢复微生物肠道群落丰富度密切相关。Ms2526菌株在调控肠道健康方面展现出良好的益生潜力。

     

    Abstract: 【Objective】 This study aimed to perform isolation, culture, and functional analysis of sheep-derived Akkermansia massiliensis, so as to provide a theoretical basis for the control of intestinal inflammatory diseases of sheep and the probiotic potential of sheep-derived Akkermansia massiliensis in intestinal health.【Method】 Fresh sheep feces were collected to isolate and identify an Akkermansia massiliensis strain under the anaerobic condition at 37 °C. The genomic characteristics and potential functions were analyzed by whole-genome sequencing. A mouse model of colitis induced by sodium dextran sulfate (DSS) was constructed, and the inhibitory effects of Akkermansia massiliensis on intestinal inflammation and its regulatory role in the intestinal microbiota composition were evaluated via gavage intervention.【Result】 Ms2526 strain showed a 100% genome integrity, a contamination rate of 0.12%, a coding density of 0.874, a genome length of 3112518 bp, a GC content of 58%, and a total of 2622 genes. Ms2526 was most closely related to the EB-AMDK-40 of Akkermansia massiliensis, clustering together with a 99% self-spreading support rate, and differed in branch length from other Akkermansia massiliensis strains such as Akk2000. The Ms2526 genome contained coding genes highly homologous to Amuc_1100 and P9 proteins. Coding genes of Ms2526 genome were mostly enriched in metabolic pathways, including signaling pathways related to carbohydrate metabolism, cofactor and vitamin metabolism, biosynthesis of other secondary metabolites, and terpenes and polyketides metabolism. Five genes were enriched in immune system signaling pathways among the organismal system categories. The Ms2526 genome contained 157 genes annotated to six major classes of carbo-hydrate active enzymes, with higher numbers of genes annotated to glycosyltransferases and glycoside hydrolases. The Ms2526 genome contained one macrolide antibiotic resistance gene, erm(B). The Ms2526 could alleviate DSS-induced colitis in mice, improve the integrity of colonic tissues and mucosal structure, and increase the abundance of intestinal microbiota species.【Conclusion】 The Ms2526 genome of sheep-derived Akkermansia massiliensis has genetic basis related to carbohydrate metabolism, immune homeostasis regulation, and mucosal repair. The Ms2526 strain effectively alleviates DSS-induced colitis in mice, and its effect is closely related to enhancing intestinal barrier integrity, regulating systemic inflammation, and restoring the richness of intestinal microbiota. The Ms2526 strain demonstrates good probiotic potential in regulating intestinal health.

     

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