橡胶树QTL定位分析研究进展

Research progress in QTL mapping of rubber tree

  • 摘要: 橡胶树是天然橡胶的主要来源,其新品种选育是支撑橡胶产业发展的核心基础,对保障并增强天然橡胶的供给能力、维护国防安全、支撑经济可持续发展具有战略意义。然而,橡胶树传统育种周期长、效率低,亟需利用现代生物技术加速新品种选育。数量性状基因座(QTL)定位分析是现代生物技术育种体系中的重要研究方法之一。文章系统综述了橡胶树QTL研究进展、存在的问题及对策。遗传图谱构建由早期基于限制性片段长度多态性(RFLP)、扩增片段长度多态性(AFLP)、简单重复序列(SSR)等标记的低分辨率图谱,发展为利用单核苷酸多态性(SNP)标记构建的高密度图谱。图谱标记数量从数百个提升至数千万个,平均图距从10 cM级缩小至0.01 cM级,为QTL精确定位打下坚实基础。重要农艺性状的QTL被大量定位,部分研究已鉴定出功能基因。针对生长性状,鉴定出多个主效QTL及候选基因(如赤霉素受体基因HbGID1)。对于核心产量性状,通过QTL定位和全基因组关联分析(GWAS)鉴定到多个可解释显著变异的位点,并筛选出与糖转运和代谢、乙烯生物合成和信号传导等通路相关的候选基因。此外,在乳管列数、胶乳生理参数(如蔗糖含量、无机磷含量)及抗病性状(如南美叶疫病、棒孢霉落叶病)方面也成功定位了相关QTL区间,初步揭示了其遗传基础。然而,群体构建周期长、表型鉴定复杂、参考基因组不统一、候选基因验证效率低等问题制约了研究的深入。针对这些问题,提出了构建大规模群体、整合高通量表型技术、统一采用端粒到端粒参考基因组、优化遗传转化体系等应对策略。随着多组学技术与生物技术的深度融合,橡胶树QTL研究将加速从位点发现迈向基因功能解析和分子设计育种的新阶段,为培育高产、优质、抗逆新品种提供科技支撑,保障国家天然橡胶供给安全。

     

    Abstract: Hevea brasiliensis is the primary source of natural rubber. The breeding of new cultivars serves as the core foundation supporting the development of the rubber industry, which is strategically vital to secure and strengthen the supply of natural rubber, safeguard national defense, and support economic sustainable development. However, long and inefficient traditional breeding cycles call for modern biotechnology to accelerate the selection and breeding of new cultivars. Quantitative trait locus (QTL) mapping is one of the important research methods for the modern biotechnological breeding system. This study systematically reviewed the research progress, problems, and countermeasures in rubber tree QTL research. The construction of genetic maps has evolved from early low-resolution maps based on markers such as restriction fragment length polymorphism (RFLP), amplified fragment length polymorphism (AFLP), and simple sequence repeats (SSR) to high-density maps of single nucleotide polymorphism (SNP) markers. The number of markers increased from hundreds to tens of millions,and the average map distance was reduced from the 10 cM level to the 0.01 cM level, laying a solid foundation for the precise localization of QTLs. Numerous QTLs for important agronomic traits were mapped, and functional genes were identified in some studies. For growth traits, major-effect QTLs and candidate genes (such as the gibberellin receptor gene HbGID1) were identified. For the core yield traits, QTL mapping and genome-wide association studies (GWAS) identified multiple loci that explained significant phenotypic variation and screened candidate genes involved in pathways such as sugar transport and metabolism, and ethylene biosynthesis and signal transduction. Furthermore, QTL intervals related to the number of laticifer rings, latex physiological parameters (such as sucrose content and inorganic phosphorus content), and disease resistance traits (e.g., South American leaf blight, Corynespora leaf fall disease) were mapped, preliminarily revealing their genetic basis. However, several constraints hindered further progress of in-depth investigation, including long population construction cycles, complex phenotypic evaluation, inconsistent reference genomes, and low efficiency in validating candidate genes. To solve these problems, corresponding strategies were proposed, such as constructing large-scale populations, integrating high-throughput phenotyping technologies, unifying the telomere-to-telomere reference genome, and optimizing genetic transformation systems. With the deep integration of multi-omics technologies and modern biotechnology, QTL research in rubber trees will acce-lerate the transition from locus discovery to the new stage of gene function analysis and molecular design breeding. These advances will provide strong scientific support for developing high-yielding, high-quality, and stress-resistant cultivars, thereby ensuring the national security of natural rubber supply.

     

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