叉角厉蝽消化相关蛋白酶基因家族鉴定及比较分析

Identification and comparative analysis of digestion-related gene families in Eocanthecona furcellata

  • 摘要: 目的 解析叉角厉蝽消化相关蛋白酶关键基因的演化特征及其对捕食性食性的适应机制,为叉角厉蝽的规模化人工饲养及生物防治应用提供理论依据。方法 以半翅目蝽次目中的2种捕食性蝽类(蠋蝽和叉角厉蝽)及2种植食性蝽类(稻绿蝽和点蜂缘蝽)为对象,通过基因组数据鉴定4种半翅目昆虫的3种消化相关蛋白酶(天冬氨酸蛋白酶、半胱氨酸蛋白酶和丝氨酸蛋白酶)基因家族,结合系统发育树构建、共线性分析和蛋白序列保守性分析筛选关键基因,通过实时荧光定量PCR检测消化相关蛋白酶关键基因在不同发育时期的表达水平;利用加权共表达网络分析(WGCNA)挖掘叉角厉蝽不同发育阶段的基因表达模式,明确消化相关蛋白酶基因的模块化调控网络。结果 对从 4种半翅目昆虫鉴定出的消化相关蛋白酶基因家族的系统发育分析显示,消化相关蛋白酶基因可明显分为3个基因家族,分别为丝氨酸蛋白酶基因家族、半胱氨酸蛋白酶基因家族和天冬氨酸蛋白酶基因家族,其中叉角厉蝽的大多数消化相关蛋白酶基因家族成员除自身外,与蠋蝽的消化相关蛋白酶基因家族成员同源性较近,而稻绿蝽的消化相关蛋白酶基因家族成员主要与点蜂缘蝽的同源性更近。根据已有文献及在叉角厉蝽饲养过程中的发现,并结合叉角厉蝽在不同发育时期的表达模式热图,筛选出6个消化相关蛋白酶关键基因,分别命名为EfAP1EfCP1、EfCP2、EfSP1、EfSP2、EfSP3。实时荧光定量PCR结果显示,叉角厉蝽的6个消化相关蛋白酶关键基因在卵期几乎不表达,1龄期时除EfCP2基因与2龄期的相对表达量差异不显著(P>0.05)外,均显著低于2~5龄和成虫期的相对表达量(P<0.05),结果与转录组数据的FPKM变化趋势一致。WGCNA共获得35个共表达模块,其中天冬氨酸蛋白酶基因主要分布在MEyellow模块、半胱氨酸蛋白酶基因主要分布在MEturquoise模块、丝氨酸蛋白酶基因则主要分布在MEblue模块,表明不同蛋白酶基因具有独立的调控网络。结论 初步揭示叉角厉蝽消化相关蛋白酶基因的演化特征,并鉴定筛选出叉角厉蝽3个消化相关蛋白酶基因家族及6个消化相关蛋白酶关键基因,明确6个消化相关蛋白酶关键基因模块化共表达特征,推测6个消化相关蛋白酶关键基因与叉角厉蝽捕食性食性适应密切相关。

     

    Abstract: Objective This study aimed to elucidate the evolutionary characteristics of key genes in digestion-related proteases in Eocanthecona furcellata and their adaptive mechanisms to predatory feeding habits, so as to provide a theoretical foundation for artificial mass rearing and biocontrol applications of Eocanthecona furcellata.Method Two predatory stink bugs (Arma custos and Eocanthecona furcellata) and two phytophagous stink bugs (Nezara viridula and Riptortus pedestris) belonged to Hemiptera: Pentatomomorpha were used to identified gene families of three digestion-related proteases (aspartic proteases, serine proteases, and cysteine proteases) across the four species using genome data. Key genes were screened through phylogenetic tree, collinearity analysis, and protein sequence conservation analysis. The expression of key digestion-related protease genes during different developmental stages were detected via quantitative reverse transcription PCR (qRT-PCR). Weighted gene co-expression network analysis (WGCNA) was employed to explore the gene expression patterns of Eocanthecona furcellata across developmental stages and delineate the modular regulatory networks of digestion-related protease genes.Result Phylogenetic analysis of the digestion-related gene families of the four Hemiptera insects revealed that digestion-related protease genes were classified into three gene families, which were serine protease, cysteine protease, and aspartic protease families. Eocanthecona furcellata exhibited significant orthologous relationships with Arma custos in digestive protease genes (excluding self-clustering nodes), while Nezara viridula showed closer orthologous relationships with Riptortus pedestris. Based on previous literature and observations during the rearing of Eocanthecona furcellata, combined with heatmaps of expression patterns in development stages of Eocanthecona furcellata, six key digestion-related protease genes were selected and designated as EfAP1EfCP1 EfCP2 EfSP1 EfSP2 EfSP3. qRT-PCR results demonstrated that: the six genes were not expressed at egg stage; at the 1st instar nymph stage, the relative expressions of the selected genes were significant higher than those at 2nd to 5th instar nymph stages and adult stage (P<0.05) except for EfCP2P>0.05). Such results were consistent with the change patterns of FPKM of transcriptomic data. WGCNA analysis identified 35 co-expression modules, with aspartic pro-tease genes were predominantly clustered in the MEyellow module, cysteine protease genes in the MEturquoise module, and serine protease genes in the MEblue module, indicating that different protease genes possess independent regulatory networks.Conclusion This study preliminarily reveals the evolutionary characteristics of digestion-related protease genes, identifies, and screens three digestion-related protease gene families and six key digestive protease genes for Eocanthecona furcellata. The modular co-expression patterns of these genes suggest that the six genes are close related to adaptation to predatory feeding habits of Eocanthecona furcellata.

     

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