不同石斛生态位差异和分子特征分析

Ecological niche differences and molecular characteristics of different Dendrobium

  • 摘要: 【目的】 通过分析不同石斛生态位差异和分子特征,揭示不同石斛种间的遗传和生态关系,为石斛野生资源的保护及利用提供科学依据。【方法】 选取3种代表性的石斛(霍山石斛、铁皮石斛和铜皮石斛)为研究对象,结合数据库和实地调查获取石斛在我国3个主要分布区的物种出现数据,从WorldClim数据库获取19个生态因子的数据,分析生态因子间的相关性,并计算3种石斛的特征生态位。对3种石斛的内部转录间隔区(ITS)序列进行PCR扩增和测序,并基于3种石斛的ITS序列相似性采用邻接法构建系统发育进化树,分析3种石斛间的系统发育关系。【结果】 生态因子间的相关分析结果显示,7个主要的生态因子为年平均温度、月平均日温差、等温性、年温差、最旱季降水量和最暖季降水量。霍山石斛与铁皮石斛和铜皮石斛的生态位重叠度较低,分别为0.95%和1.87%,表明霍山石斛具有特定需求的生态位。铁皮石斛与铜皮石斛的生态位重叠度较高,达51.40%。对3种石斛进行两两比较时,生态位等价性的0假设未被拒绝(P>0.05),说明尽管3种石斛目前的生态位存在差异,但三者占据相似环境生态位的可能性不能被排除,表明田间混合栽培3种石斛存在一定可行性。铁皮石斛和铜皮石斛的重叠部分最多,说明二者的环境条件或资源共享程度最高,竞争最激烈。3种石斛样本的ITS序列的长度为690~710 bp。系统发育进化树分析结果显示,铁皮石斛独自形成1个支持度很高的类群,而铜皮石斛和霍山石斛的个体被归入到2个支持度较低的其他类群。【结论】 相比铁皮石斛和铜皮石斛,霍山石斛对生态因子的要求更为特定,霍山石斛和铜皮石斛的亲缘关系较近。采用ITS序列分析能将铁皮石斛从铜皮石斛和霍山石斛中区分。

     

    Abstract: 【Objective】 By analyzing the ecological niche differences and molecular characteristics of different Dendro-bium species, the genetic and ecological relationships among different Dendrobium species were revealed,which providedscientific basis for the protection and utilization of Dendrobium wild resources. 【Method】Three representative DendrobiumD. huoshanense,D. officinale and D. moniliforme) were selected as research subjects. Species occurrence data forthese Dendrobium species in 3 major distribution areas in China were obtained through a combination of database informa-tion and field surveys. Data on 19 ecological factors were retrieved from the WorldClim database. The correlations amongthese ecological factors were analyzed,and the characteristic niches of the 3 Dendrobium species were calculated. Theinternal transcribed spacer(ITS) sequences of the 3 Dendrobium species were amplified and sequenced using PCR. Basedon the similarity of the ITS sequences of the 3 Dendrobium species,a phylogenetic tree was constructed using theNeighbor-joining method to analyze their phylogenetic relationships. 【Result】 The correlation analysis of ecologicalfactors revealed that the 7 major ecological factors were annual mean temperature,monthly mean diurnal temperaturerange,isothermality,annual temperature range,precipitation of the driest season,and precipitation of the warmest season.The niche overlap between D. huoshanense and the other 2 species,D. officinale and D. moniliforme,was relatively low,at 0.95% and 1.87% respectively,indicating that D. huoshanense had a specific ecological niche requirement. In contrast,the niche overlap between D. officinale and D. moniliforme was high,reaching 51.40%. When the 3 Dendrobium specieswere compared in pairwise, the null hypothesis of niche equivalence was not rejected( P>0.05). The 3 Dendrobium spe-cies had different ecological niches at present, the possibility that they occupied similar environmental niches could not beruled out, which indicated that the mixed cultivation of the 3 Dendrobium species in the field was feasible. The overlap ofD. officinale and D. moniliforme was the most, which indicated that the environmental conditions or resource sharing de-gree of the two was the highest, and the competition was the most intense. The length of ITS sequence of the 3 Dendro-bium species ranged from 690 to 710 bp. Phylogenetic tree results showed that species alone formed 1 highly supportedgroup, while the individuals of D. moniliforme and D. huoshanense were grouped into 2 other groups with low support. 【Conclusion】 Compared with D. officinale and D. moniliforme,D. huoshanense has more specific requirements for eco-logical factors. D. huoshanense and D. moniliforme are more closely related. ITS sequence analysis can distinguish D. officinale from D. moniliforme and D. huoshanense.

     

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