热带睡莲蓝鸟瓶插过程中弯茎生理变化及转录组分析

Physiological changes and transcriptome analysis of stem bending in tropical Nymphaea ‘Blue Bird’ during vase life

  • 摘要: 【目的】 探究蓝鸟睡莲切花在瓶插过程中的花茎生理变化并进行转录组测序分析,为揭示睡莲在瓶插过程中花茎弯曲的分子机制及培育抗茎秆弯曲睡莲品种提供理论依据。【方法】 以蓝鸟睡莲为试验材料进行切花瓶插,每天固定时间测定瓶插睡莲的生理指标,根据睡莲弯茎程度分为4个时期,截取花茎4个时期弯茎样本(分别标记为Dor-sal_1、Dorsal_2、Dorsal_3和Dorsal_4),测定不同样本中可溶性糖和淀粉含量,基于转录组测序技术筛选差异表达基因(DEG),对DEGs进行GO功能注释分析、KEGG信号通路富集分析和K-means分析,挖掘导致睡莲切花弯茎的关键代谢通路及关键基因,并通过实时荧光定量PCR验证基因相对表达量与转录组数据的一致性。【结果】 睡莲的吸水量、失水量、水分平衡值均呈先上升后下降的变化趋势,睡莲花茎的平均伸长量为4.45 cm,占原始长度的17.8%。Dorsal_1和Dorsal_2样本中淀粉含量无显著差异(P>0.05),但二者均显著高于Dorsal_3和Dorsal_4(P<0.05,下同),且Dorsal_3样本中淀粉含量显著高于Dorsal_4。Dorsal_1vsDorsal_2组、Dorsal_1vsDorsal_3组、Dorsal_1vsDorsal_4组、Dorsal_2 vs Dorsal_3组、Dorsal_3 vs Dorsal_4组DEGs数分别为5149、6903、5483、2456和269个,其中下调表达基因分别为2826、3822、3068、1313和113个,上调表达基因分别为2323、3081、2415、1143和156个。4个不同弯茎时期样本间共有112个DEGs。GO功能注释和KEGG信号通路富集分析结果显示,睡莲弯茎中DEGs主要富集在与光合作用、细胞壁合成和植物激素与信号转导等相关的生物途径中。K-means分析结果显示,DEGs被聚类为9类(Class 1~Class 9),通过Class 1与Venn图共筛选出25个DEGs,Class 5筛选到19个调控睡莲弯茎相关基因。实时荧光定量PCR验证结果显示,DEGs相对表达量与转录组数据基因表达基本一致。【结论】 水分、淀粉和可溶性糖含量以及光照响应、植物激素、细胞壁形成与分解等因素的相互作用共同导致睡莲弯茎。推测与生长素及细胞壁结构相关的基因是影响睡莲弯茎的关键基因群。

     

    Abstract: 【Objective】 To investigate the physiological changes and transcriptome sequencing in the stems of Nymphaea ‘Blue Bird’ cut flowers during vase life, which could elucidate the molecular mechanisms underlying stem ben-ding during vase life and provide theoretical reference for breeding water lily varieties resistant to stem bending. 【Method】 Cut flowers of Nymphaea‘ Blue Bird’ were subjected to vase-holding experiments. Physiological parameters were measured daily at fixed intervals.Based on bending severity of water lily,stems were categorized into 4 developmental periods(designated as Dorsal_1,Dorsal_2,Dorsal_3 and Dorsal_4).Soluble sugar and starch contents were detected in dif‐ferent samples.Transcriptome sequencing was performed to screen differentially expressed genes(DEGs).GO functional annotation analysis,KEGG signaling pathway enrichment analysis and K-means analysis were performed on DEGs to explore the key metabolic pathways and key genes that led to the stem bending of cut water lily.Quantitative real-time fluorescence quantitative PCR validated the consistency between gene relative expression and transcriptome data. 【Result】 Water absorption,water loss and water balance value exhibited an initial increase followed by a decline.The average stem elongation was 4.45 cm,accounting for 17.8%of original length.Starch content showed no significant difference between Dorsal_1 and Dorsal_2(P>0.05),but both were significantly higher than Dorsal_3 and Dorsal_4(P<0.05,the same be‐low),the starch content of Dorsal_3 samples was significantly higher than that of Dorsal_4.The numbers of DEGs in Dor‐sal_1 vs Dorsal_2 group,Dorsal_1 vs Dorsal_3 group,Dorsal_1 vs Dorsal_4 group,Dorsal_2 vs Dorsal_3 group,Dor‐sal_3 vs Dorsal_4 group were 5149,6903,5483,2456 and 269,in which down-regulated genes nembers were 2826,3822,3068,1313 and 113,up-regulated genes numbers were 2323,3081,2415,1143 and 156 respectively.There were112 shared DEGs in samples of 4 different stem bending periods.GO functional annotation and KEGG signaling pathway enrichment analysis showed that DEGs in stem bending water lily was mainly enriched in biological pathways related to photosynthesis,cell wall synthesis,plant hormones and signal transduction.The results of K-means analysis showed that DEGs were clustered into 9 classes (Class 1-Class 9),25 DEGs were screened by Class 1 and Venn diagram,and 19genes related to the regulation of water lily stem bending were screened by Class 5.The results of real-time fluorescence quantitative PCR showed that the relative expression of DEGs was basically consistent with the transcriptome data. 【Conclusion】 The bending of water lily stems arises from the synergistic interactions among multiple factors,including water,starch and soluble sugar contents,light responsiveness,phytohormones,cell wall biosynthesis and degradation.It is hypothesized that auxin related genes and cell wall structural related genes form critical gene clusters responsible for regu‐lating stem bending of water lily.

     

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