长日照条件下2个热带玉米自交系的蛋白质组学分析

Proteomics analysis of two tropical maize inbred lines under long sunshine condition

  • 摘要: 【目的】对长日照条件下2个热带玉米自交系进行蛋白质组学分析,为揭示玉米在长日照下的开花分子调控机制提供理论依据。【方法】以光敏型(FT32)和光钝型(FQR273)热带玉米自交系为材料,利用串联质谱标签(TMT)技术筛选差异蛋白,并对其进行GO功能注释及KEGG信号通路富集分析,构建蛋白间的相互作用网络。【结果】从长日照条件下FT32和FQR273热带玉米自交系4叶期叶片样品鉴定出6082个有效蛋白,其中显著差异蛋白605个(107个上调表达,498个下调表达)。605个差异蛋白注释到生物学过程、细胞组分和分子功能三大类,共79个条目,其中在生物学过程分类中,主要注释为翻译过程、谷胱甘肽代谢过程和蛋白质折叠;在细胞组分分类中,主要注释为膜整体组分、细胞质和叶绿体;在分子功能分类中,主要注释为ATP结合、金属离子结合和核糖体结构组成。有140个差异蛋白富集到13条KEGG信号通路,其中主要富集在次生代谢物生物合成、卟啉和叶绿素代谢和氨基酸生物合成。磷酸合成、核糖体代谢和翻译过程是玉米叶片在长日照条件下的关键途径。对被功能注释的196个蛋白进行归类和深入分析,根据生物学功能将其分为四大类,分别为活性氧(ROS)体内平衡(33个)、蛋白代谢(59个)、相关转移酶(25个)及其他功能(79个)。【结论】在长日照条件下,光敏型FT32玉米相对于光钝型FQR273的ROS体内平衡能力和蛋白代谢相关蛋白及相关转移酶活性均呈下调表达,其他功能蛋白种类繁多且功能复杂,以不同的方式发挥作用。即在长日照条件下,光敏感FT32玉米叶片以核糖体代谢和翻译过程为主的调控系统,维持玉米正常生长。

     

    Abstract: 【Objective】 Proteomics analysis of two tropical maize inbred lines under long sunshine condition was conducted to provide theoretical basis for the molecular regulatory mechanism of maize under long sunshine condition.【Method】 Photosensitive(FT32) and photonesthesia(FQR273) tropical maize inbred lines were selected as materials,and differential proteins were screened by tandem mass tag(TMT),and their GO function annotation and KEGG signal pathway enrichment analysis were performed to construct the interaction network between differential proteins.【Result】 A total of 6082 effective proteins were identified from leaf samples of four-leaf stage of FT32 and FQR273 tropical maize inbred lines under long sunshine conditions,among which 605 were significantly differentially expressed(107 were up-regulated and 498 down-regulated). And 605 differential proteins were annotated into three categories of biological process,cell components and molecular functions,with a total of 79 items. In the classification of biological process,the main annotations were translation process,glutathione metabolism process and protein folding. In the classification of cell components,the main annotations were integral components of membrane,cytoplasm and chloroplasts. In the classification of molecular functions,the main annotations were ATP binding,metal ion binding and the structure composition of ribosome. Moreover,140 differential proteins were enriched to 13 KEGG signal pathways,which were mainly enriched in secondary metabolite biosynthesis,porphyrin and chlorophyll metabolism,and amino acid biosynthesis. Phosphate synthetase,ribosome metabolism and translation process were the key pathways of maize leaves under long sunshine conditions. A total of 196 functionally annotated proteins were classified and analyzed in depth,and were divided into four categories according to biological functions.The proteins were involved in reactive oxygen species(ROS) homeostasis(33), protein metabolism(59),related transferases(25),and other functions(79).【Conclusion】 Under long sunshine condition,ROS homeostasis,protein metabolism related proteins and related transferase activity of photosensitive FT32 maize are down-regulated compared with photonesthesia FQR273 maize. Other functional proteins are diverse and have complex functions,and play their roles in different ways. In other words,under long sunshine condition,photosensitive FT32 maize leaves mainly regulate ribosome metabolism and translation process to maintain the normal growth of maize.

     

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